Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col7a1Q63870 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Col7a1Q63870 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col7a1Q63870 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.97□□□□□ -0.33
Col7a1Q63870 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.97□□□□□ -0.33
Col7a1Q63870 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.97□□□□□ -0.33
Col7a1Q63870 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.97□□□□□ -0.33
Col7a1Q63870 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col7a1Q63870 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col7a1Q63870 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.97□□□□□ -0.33
Col7a1Q63870 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.96□□□□□ -0.33
Col7a1Q63870 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.96□□□□□ -0.33
Col7a1Q63870 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.96□□□□□ -0.33
Col7a1Q63870 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.96□□□□□ -0.33
Col7a1Q63870 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.96□□□□□ -0.33
Col7a1Q63870 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Col7a1Q63870 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col7a1Q63870 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col7a1Q63870 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col7a1Q63870 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.95□□□□□ -0.34
Col7a1Q63870 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.95□□□□□ -0.34
Col7a1Q63870 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col7a1Q63870 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col7a1Q63870 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col7a1Q63870 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col7a1Q63870 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Col7a1Q63870 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col7a1Q63870 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.95□□□□□ -0.34
Col7a1Q63870 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col7a1Q63870 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col7a1Q63870 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.95□□□□□ -0.34
Col7a1Q63870 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Col7a1Q63870 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col7a1Q63870 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col7a1Q63870 Gm15806-201ENSMUST00000120696 955 ntBASIC12.95□□□□□ -0.34
Col7a1Q63870 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.95□□□□□ -0.34
Col7a1Q63870 Gm17420-201ENSMUST00000164753 153 ntBASIC12.95□□□□□ -0.34
Col7a1Q63870 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col7a1Q63870 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.95□□□□□ -0.34
Col7a1Q63870 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col7a1Q63870 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col7a1Q63870 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.95□□□□□ -0.34
Col7a1Q63870 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col7a1Q63870 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col7a1Q63870 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Col7a1Q63870 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col7a1Q63870 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.94□□□□□ -0.34
Col7a1Q63870 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col7a1Q63870 Gm20445-201ENSMUST00000061905 565 ntBASIC12.94□□□□□ -0.34
Col7a1Q63870 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col7a1Q63870 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Col7a1Q63870 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Col7a1Q63870 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.94□□□□□ -0.34
Col7a1Q63870 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.94□□□□□ -0.34
Col7a1Q63870 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.94□□□□□ -0.34
Col7a1Q63870 Gm15483-201ENSMUST00000120338 456 ntBASIC12.94□□□□□ -0.34
Col7a1Q63870 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col7a1Q63870 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.94□□□□□ -0.34
Col7a1Q63870 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col7a1Q63870 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col7a1Q63870 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col7a1Q63870 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col7a1Q63870 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.94□□□□□ -0.34
Col7a1Q63870 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col7a1Q63870 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col7a1Q63870 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.93□□□□□ -0.34
Col7a1Q63870 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.93□□□□□ -0.34
Col7a1Q63870 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.93□□□□□ -0.34
Col7a1Q63870 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.93□□□□□ -0.34
Col7a1Q63870 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.93□□□□□ -0.34
Col7a1Q63870 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col7a1Q63870 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col7a1Q63870 Olfr582-201ENSMUST00000098212 960 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms