Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Six1Q62231 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.21■□□□□ 0.19
Six1Q62231 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Six1Q62231 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.21■□□□□ 0.19
Six1Q62231 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Six1Q62231 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Six1Q62231 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.21■□□□□ 0.19
Six1Q62231 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Six1Q62231 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Six1Q62231 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Six1Q62231 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Six1Q62231 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.21■□□□□ 0.18
Six1Q62231 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.2■□□□□ 0.18
Six1Q62231 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.2■□□□□ 0.18
Six1Q62231 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Six1Q62231 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Six1Q62231 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Six1Q62231 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.2■□□□□ 0.18
Six1Q62231 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Six1Q62231 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Six1Q62231 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Six1Q62231 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Six1Q62231 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Six1Q62231 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Six1Q62231 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six1Q62231 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Six1Q62231 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Six1Q62231 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.19■□□□□ 0.18
Six1Q62231 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six1Q62231 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six1Q62231 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Six1Q62231 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six1Q62231 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six1Q62231 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Six1Q62231 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.19■□□□□ 0.18
Six1Q62231 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.19■□□□□ 0.18
Six1Q62231 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Six1Q62231 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Six1Q62231 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Six1Q62231 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six1Q62231 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six1Q62231 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six1Q62231 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Six1Q62231 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six1Q62231 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Six1Q62231 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Six1Q62231 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Six1Q62231 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Six1Q62231 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Gm11950-201ENSMUST00000121615 838 ntBASIC16.18■□□□□ 0.18
Six1Q62231 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.18■□□□□ 0.18
Six1Q62231 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Six1Q62231 Gm25406-201ENSMUST00000157599 105 ntBASIC16.18■□□□□ 0.18
Six1Q62231 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms