Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.42■□□□□ 0.7
Trim27Q62158 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim27Q62158 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim27Q62158 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim27Q62158 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim27Q62158 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trim27Q62158 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim27Q62158 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim27Q62158 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim27Q62158 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim27Q62158 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim27Q62158 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim27Q62158 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim27Q62158 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim27Q62158 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim27Q62158 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim27Q62158 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.41■□□□□ 0.7
Trim27Q62158 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim27Q62158 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim27Q62158 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim27Q62158 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Trim27Q62158 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim27Q62158 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim27Q62158 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim27Q62158 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim27Q62158 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.4■□□□□ 0.7
Trim27Q62158 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.4■□□□□ 0.7
Trim27Q62158 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trim27Q62158 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.4■□□□□ 0.7
Trim27Q62158 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.4■□□□□ 0.7
Trim27Q62158 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.4■□□□□ 0.7
Trim27Q62158 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trim27Q62158 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.4■□□□□ 0.7
Trim27Q62158 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim27Q62158 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trim27Q62158 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim27Q62158 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trim27Q62158 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trim27Q62158 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim27Q62158 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.39■□□□□ 0.7
Trim27Q62158 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Trim27Q62158 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Gm12497-201ENSMUST00000138778 237 ntBASIC19.39■□□□□ 0.69
Trim27Q62158 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.39■□□□□ 0.69
Trim27Q62158 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Trim27Q62158 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Trim27Q62158 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim27Q62158 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim27Q62158 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 Gm12644-201ENSMUST00000119935 606 ntBASIC19.38■□□□□ 0.69
Trim27Q62158 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.38■□□□□ 0.69
Trim27Q62158 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Trim27Q62158 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.38■□□□□ 0.69
Trim27Q62158 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.38■□□□□ 0.69
Trim27Q62158 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim27Q62158 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 Gm18622-201ENSMUST00000219361 595 ntBASIC19.38■□□□□ 0.69
Trim27Q62158 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim27Q62158 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.38■□□□□ 0.69
Trim27Q62158 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim27Q62158 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms