Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SspnQ62147 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SspnQ62147 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.27□□□□□ -0.28
SspnQ62147 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SspnQ62147 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SspnQ62147 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.27□□□□□ -0.29
SspnQ62147 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.27□□□□□ -0.29
SspnQ62147 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SspnQ62147 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SspnQ62147 Gm9987-201ENSMUST00000069768 567 ntBASIC13.27□□□□□ -0.29
SspnQ62147 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SspnQ62147 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SspnQ62147 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SspnQ62147 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SspnQ62147 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SspnQ62147 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SspnQ62147 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.27□□□□□ -0.29
SspnQ62147 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.27□□□□□ -0.29
SspnQ62147 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SspnQ62147 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SspnQ62147 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SspnQ62147 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SspnQ62147 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.27□□□□□ -0.29
SspnQ62147 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SspnQ62147 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.26□□□□□ -0.29
SspnQ62147 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.26□□□□□ -0.29
SspnQ62147 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.26□□□□□ -0.29
SspnQ62147 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SspnQ62147 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SspnQ62147 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SspnQ62147 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SspnQ62147 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SspnQ62147 Gm10013-201ENSMUST00000106074 672 ntBASIC13.25□□□□□ -0.29
SspnQ62147 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.25□□□□□ -0.29
SspnQ62147 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.25□□□□□ -0.29
SspnQ62147 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.25□□□□□ -0.29
SspnQ62147 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.25□□□□□ -0.29
SspnQ62147 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
SspnQ62147 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
SspnQ62147 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SspnQ62147 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SspnQ62147 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SspnQ62147 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SspnQ62147 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SspnQ62147 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SspnQ62147 Rubie-203ENSMUST00000227803 2430 ntBASIC13.24□□□□□ -0.29
SspnQ62147 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SspnQ62147 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SspnQ62147 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SspnQ62147 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SspnQ62147 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SspnQ62147 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.24□□□□□ -0.29
SspnQ62147 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.24□□□□□ -0.29
SspnQ62147 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SspnQ62147 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SspnQ62147 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SspnQ62147 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms