Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfaip3Q60769 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfaip3Q60769 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfaip3Q60769 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.86□□□□□ -0.03
Tnfaip3Q60769 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfaip3Q60769 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfaip3Q60769 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Tnfaip3Q60769 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfaip3Q60769 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfaip3Q60769 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfaip3Q60769 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Tnfaip3Q60769 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.86□□□□□ -0.03
Tnfaip3Q60769 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Tnfaip3Q60769 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Tnfaip3Q60769 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfaip3Q60769 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfaip3Q60769 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm8825-201ENSMUST00000182565 998 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm4518-201ENSMUST00000182638 718 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Tnfaip3Q60769 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.03
Tnfaip3Q60769 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfaip3Q60769 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Tnfaip3Q60769 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfaip3Q60769 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Tnfaip3Q60769 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfaip3Q60769 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfaip3Q60769 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfaip3Q60769 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Tnfaip3Q60769 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Tnfaip3Q60769 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.83□□□□□ -0.04
Tnfaip3Q60769 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Tnfaip3Q60769 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.83□□□□□ -0.04
Tnfaip3Q60769 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms