Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Gm10060-201ENSMUST00000212002 111 ntBASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps54Q5SPW0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps54Q5SPW0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps54Q5SPW0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps54Q5SPW0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Vps54Q5SPW0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps54Q5SPW0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.96■□□□□ 0.63
Vps54Q5SPW0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps54Q5SPW0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Vps54Q5SPW0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps54Q5SPW0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps54Q5SPW0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps54Q5SPW0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps54Q5SPW0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Vps54Q5SPW0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps54Q5SPW0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Vps54Q5SPW0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Gm7230-201ENSMUST00000173026 815 ntBASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vps54Q5SPW0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Gm18195-201ENSMUST00000207604 706 ntBASIC18.94■□□□□ 0.62
Vps54Q5SPW0 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vps54Q5SPW0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Vps54Q5SPW0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Vps54Q5SPW0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms