Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-1Q5R1I8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-1Q5R1I8 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3-1Q5R1I8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3-1Q5R1I8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.71□□□□□ -0.7
Trav3-1Q5R1I8 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Trav3-1Q5R1I8 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3-1Q5R1I8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.7
Trav3-1Q5R1I8 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav3-1Q5R1I8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Trav3-1Q5R1I8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Trav3-1Q5R1I8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Gm5357-201ENSMUST00000212720 1924 ntBASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav3-1Q5R1I8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms