Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Gm15565-201ENSMUST00000118890 427 ntBASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Gm17661-201ENSMUST00000170317 270 ntBASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav8d-1Q5R1H8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Gm43352-201ENSMUST00000196419 3065 ntBASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Gm2274-201ENSMUST00000184539 609 ntBASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 AC153881.2-201ENSMUST00000214877 204 ntBASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav8d-1Q5R1H8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Gm6433-201ENSMUST00000118634 875 ntBASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Il3ra-202ENSMUST00000223589 738 ntBASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav8d-1Q5R1H8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav8d-1Q5R1H8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms