Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm12441-201ENSMUST00000121806 588 ntBASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm18421-201ENSMUST00000204122 625 ntBASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.33□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gm11539-201ENSMUST00000119837 557 ntBASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav15-1-dv6-1Q5R1D2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms