Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rnf43Q5NCP0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf43Q5NCP0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Gm8396-201ENSMUST00000057361 823 ntBASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rnf43Q5NCP0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Gm15358-201ENSMUST00000119249 520 ntBASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf43Q5NCP0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Gm17271-201ENSMUST00000165535 355 ntBASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms