Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.68■□□□□ 0.1
Scn2bQ56A07 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn2bQ56A07 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Scn2bQ56A07 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn2bQ56A07 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.67■□□□□ 0.1
Scn2bQ56A07 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn2bQ56A07 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Gm6623-201ENSMUST00000173570 544 ntBASIC15.65■□□□□ 0.1
Scn2bQ56A07 Gm6345-202ENSMUST00000180900 204 ntBASIC15.65■□□□□ 0.1
Scn2bQ56A07 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Scn2bQ56A07 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.65■□□□□ 0.1
Scn2bQ56A07 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn2bQ56A07 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.64■□□□□ 0.09
Scn2bQ56A07 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn2bQ56A07 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn2bQ56A07 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Scn2bQ56A07 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scn2bQ56A07 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scn2bQ56A07 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scn2bQ56A07 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Scn2bQ56A07 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Scn2bQ56A07 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn2bQ56A07 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn2bQ56A07 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn2bQ56A07 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.64■□□□□ 0.09
Scn2bQ56A07 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Scn2bQ56A07 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms