Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tmem40Q4FJU9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tmem40Q4FJU9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Gm2756-201ENSMUST00000195851 400 ntBASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tmem40Q4FJU9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms