Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Gm11452-201ENSMUST00000122376 690 ntBASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nlrc4Q3UP24 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nlrc4Q3UP24 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Gm13884-201ENSMUST00000118103 829 ntBASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nlrc4Q3UP24 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Gm13418-201ENSMUST00000119097 944 ntBASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Gm4535-201ENSMUST00000182274 558 ntBASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Mir8098-201ENSMUST00000184011 137 ntBASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Rps4l-201ENSMUST00000071745 943 ntBASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Gm10355-201ENSMUST00000097146 517 ntBASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nlrc4Q3UP24 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Gm11780-201ENSMUST00000136880 516 ntBASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nlrc4Q3UP24 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms