Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Gm6420-201ENSMUST00000193885 723 ntBASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cks1brtQ3UNC9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cks1brtQ3UNC9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cks1brtQ3UNC9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cks1brtQ3UNC9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cks1brtQ3UNC9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cks1brtQ3UNC9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cks1brtQ3UNC9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cks1brtQ3UNC9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cks1brtQ3UNC9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cks1brtQ3UNC9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cks1brtQ3UNC9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.46□□□□□ -0.58
Cks1brtQ3UNC9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cks1brtQ3UNC9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Gm2399-201ENSMUST00000104944 225 ntBASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cks1brtQ3UNC9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Gm45102-201ENSMUST00000207427 857 ntBASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cks1brtQ3UNC9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cks1brtQ3UNC9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms