Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf44Q3UHJ8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Gm12497-201ENSMUST00000138778 237 ntBASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Gm27459-201ENSMUST00000184860 107 ntBASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Gm7506-201ENSMUST00000207758 815 ntBASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rnf44Q3UHJ8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf44Q3UHJ8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf44Q3UHJ8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf44Q3UHJ8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf44Q3UHJ8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf44Q3UHJ8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Gm6257-201ENSMUST00000163864 910 ntBASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Gm43347-201ENSMUST00000200226 580 ntBASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rnf44Q3UHJ8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rnf44Q3UHJ8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms