Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cul4aQ3TCH7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cul4aQ3TCH7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cul4aQ3TCH7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Gm9013-201ENSMUST00000132939 882 ntBASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cul4aQ3TCH7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cul4aQ3TCH7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cul4aQ3TCH7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cul4aQ3TCH7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms