Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nhej1Q3KNJ2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nhej1Q3KNJ2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nhej1Q3KNJ2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nhej1Q3KNJ2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nhej1Q3KNJ2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nhej1Q3KNJ2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nhej1Q3KNJ2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nhej1Q3KNJ2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nhej1Q3KNJ2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nhej1Q3KNJ2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Gm11355-201ENSMUST00000121120 306 ntBASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nhej1Q3KNJ2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Gm43799-201ENSMUST00000201845 579 ntBASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Nhej1Q3KNJ2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nhej1Q3KNJ2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.85■□□□□ 0.29
Nhej1Q3KNJ2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms