Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Gm27702-201ENSMUST00000184512 56 ntBASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkd1l3Q2EG98 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkd1l3Q2EG98 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.15□□□□□ -0.14
Pkd1l3Q2EG98 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Gm6257-201ENSMUST00000163864 910 ntBASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.14□□□□□ -0.15
Pkd1l3Q2EG98 Gm10175-201ENSMUST00000086013 645 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms