Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx4Q07424 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx4Q07424 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx4Q07424 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx4Q07424 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx4Q07424 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.24□□□□□ -0.45
Cdx4Q07424 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx4Q07424 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdx4Q07424 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx4Q07424 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdx4Q07424 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Cdx4Q07424 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdx4Q07424 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdx4Q07424 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cdx4Q07424 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.23□□□□□ -0.45
Cdx4Q07424 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.23□□□□□ -0.45
Cdx4Q07424 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Cdx4Q07424 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cdx4Q07424 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdx4Q07424 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdx4Q07424 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.22□□□□□ -0.45
Cdx4Q07424 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cdx4Q07424 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdx4Q07424 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cdx4Q07424 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Cdx4Q07424 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdx4Q07424 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cdx4Q07424 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.22□□□□□ -0.45
Cdx4Q07424 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cdx4Q07424 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cdx4Q07424 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cdx4Q07424 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdx4Q07424 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cdx4Q07424 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.21□□□□□ -0.45
Cdx4Q07424 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.21□□□□□ -0.45
Cdx4Q07424 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdx4Q07424 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdx4Q07424 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.21□□□□□ -0.45
Cdx4Q07424 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx4Q07424 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Cdx4Q07424 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cdx4Q07424 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.21□□□□□ -0.45
Cdx4Q07424 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms