Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.14■□□□□ 0.17
Thumpd3P97770 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd3P97770 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.14■□□□□ 0.17
Thumpd3P97770 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd3P97770 Gm11355-201ENSMUST00000121120 306 ntBASIC16.14■□□□□ 0.17
Thumpd3P97770 Gm26039-201ENSMUST00000158152 144 ntBASIC16.14■□□□□ 0.17
Thumpd3P97770 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd3P97770 Ank2-226ENSMUST00000189368 339 ntBASIC16.14■□□□□ 0.17
Thumpd3P97770 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Thumpd3P97770 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd3P97770 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd3P97770 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd3P97770 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd3P97770 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd3P97770 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd3P97770 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd3P97770 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd3P97770 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd3P97770 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Thumpd3P97770 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.14■□□□□ 0.17
Thumpd3P97770 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.14■□□□□ 0.17
Thumpd3P97770 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.13■□□□□ 0.17
Thumpd3P97770 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Thumpd3P97770 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Thumpd3P97770 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Thumpd3P97770 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Gm9103-201ENSMUST00000119371 405 ntBASIC16.13■□□□□ 0.17
Thumpd3P97770 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.13■□□□□ 0.17
Thumpd3P97770 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.13■□□□□ 0.17
Thumpd3P97770 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Thumpd3P97770 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Thumpd3P97770 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.12■□□□□ 0.17
Thumpd3P97770 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.12■□□□□ 0.17
Thumpd3P97770 Gm27704-201ENSMUST00000185094 107 ntBASIC16.12■□□□□ 0.17
Thumpd3P97770 Gm29518-201ENSMUST00000190858 372 ntBASIC16.12■□□□□ 0.17
Thumpd3P97770 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.12■□□□□ 0.17
Thumpd3P97770 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.12■□□□□ 0.17
Thumpd3P97770 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Thumpd3P97770 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Gm10566-201ENSMUST00000086739 996 ntBASIC16.12■□□□□ 0.17
Thumpd3P97770 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Thumpd3P97770 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Thumpd3P97770 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.12■□□□□ 0.17
Thumpd3P97770 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.12■□□□□ 0.17
Thumpd3P97770 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Thumpd3P97770 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Thumpd3P97770 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thumpd3P97770 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.11■□□□□ 0.17
Thumpd3P97770 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thumpd3P97770 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thumpd3P97770 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Thumpd3P97770 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thumpd3P97770 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thumpd3P97770 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Thumpd3P97770 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Thumpd3P97770 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.11■□□□□ 0.17
Thumpd3P97770 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thumpd3P97770 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thumpd3P97770 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thumpd3P97770 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thumpd3P97770 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Thumpd3P97770 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Thumpd3P97770 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.11■□□□□ 0.17
Thumpd3P97770 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Thumpd3P97770 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Thumpd3P97770 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms