Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc1P97496 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Smarcc1P97496 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc1P97496 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc1P97496 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc1P97496 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.73■□□□□ 0.75
Smarcc1P97496 Gm43474-201ENSMUST00000196415 774 ntBASIC19.73■□□□□ 0.75
Smarcc1P97496 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.73■□□□□ 0.75
Smarcc1P97496 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc1P97496 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc1P97496 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smarcc1P97496 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc1P97496 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smarcc1P97496 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc1P97496 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Smarcc1P97496 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc1P97496 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarcc1P97496 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
Smarcc1P97496 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc1P97496 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc1P97496 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc1P97496 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc1P97496 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Smarcc1P97496 Mir7023-201ENSMUST00000185093 64 ntBASIC19.72■□□□□ 0.75
Smarcc1P97496 Thap2-203ENSMUST00000218989 527 ntBASIC19.72■□□□□ 0.75
Smarcc1P97496 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smarcc1P97496 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smarcc1P97496 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc1P97496 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc1P97496 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc1P97496 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarcc1P97496 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Smarcc1P97496 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc1P97496 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Smarcc1P97496 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.71■□□□□ 0.75
Smarcc1P97496 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.71■□□□□ 0.75
Smarcc1P97496 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc1P97496 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc1P97496 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.71■□□□□ 0.75
Smarcc1P97496 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc1P97496 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc1P97496 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc1P97496 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Smarcc1P97496 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.71■□□□□ 0.75
Smarcc1P97496 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarcc1P97496 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.71■□□□□ 0.75
Smarcc1P97496 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.71■□□□□ 0.75
Smarcc1P97496 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Smarcc1P97496 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc1P97496 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc1P97496 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc1P97496 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc1P97496 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.7■□□□□ 0.74
Smarcc1P97496 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Smarcc1P97496 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc1P97496 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Smarcc1P97496 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc1P97496 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.7■□□□□ 0.74
Smarcc1P97496 Rprl2-201ENSMUST00000157150 290 ntBASIC19.7■□□□□ 0.74
Smarcc1P97496 Gm18889-201ENSMUST00000174284 929 ntBASIC19.7■□□□□ 0.74
Smarcc1P97496 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.7■□□□□ 0.74
Smarcc1P97496 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.7■□□□□ 0.74
Smarcc1P97496 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.7■□□□□ 0.74
Smarcc1P97496 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.7■□□□□ 0.74
Smarcc1P97496 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc1P97496 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc1P97496 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.7■□□□□ 0.74
Smarcc1P97496 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Smarcc1P97496 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.7■□□□□ 0.74
Smarcc1P97496 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc1P97496 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc1P97496 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc1P97496 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarcc1P97496 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.69■□□□□ 0.74
Smarcc1P97496 Gm20553-201ENSMUST00000204205 844 ntBASIC19.69■□□□□ 0.74
Smarcc1P97496 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.69■□□□□ 0.74
Smarcc1P97496 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.69■□□□□ 0.74
Smarcc1P97496 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.69■□□□□ 0.74
Smarcc1P97496 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Smarcc1P97496 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smarcc1P97496 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Smarcc1P97496 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc1P97496 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Smarcc1P97496 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc1P97496 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc1P97496 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms