Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43bP86448 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43bP86448 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43bP86448 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43bP86448 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.3■□□□□ 0.2
Trim43bP86448 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43bP86448 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43bP86448 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43bP86448 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43bP86448 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim43bP86448 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
Trim43bP86448 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.29■□□□□ 0.2
Trim43bP86448 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim43bP86448 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim43bP86448 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trim43bP86448 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim43bP86448 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Trim43bP86448 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43bP86448 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim43bP86448 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.28■□□□□ 0.2
Trim43bP86448 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim43bP86448 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trim43bP86448 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trim43bP86448 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim43bP86448 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim43bP86448 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim43bP86448 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim43bP86448 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Trim43bP86448 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
Trim43bP86448 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trim43bP86448 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim43bP86448 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim43bP86448 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43bP86448 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.28■□□□□ 0.2
Trim43bP86448 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Trim43bP86448 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43bP86448 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43bP86448 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43bP86448 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43bP86448 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43bP86448 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43bP86448 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.27■□□□□ 0.2
Trim43bP86448 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43bP86448 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim43bP86448 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Trim43bP86448 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43bP86448 Gm27704-201ENSMUST00000185094 107 ntBASIC16.27■□□□□ 0.2
Trim43bP86448 Gm37722-201ENSMUST00000193757 208 ntBASIC16.27■□□□□ 0.2
Trim43bP86448 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43bP86448 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim43bP86448 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43bP86448 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43bP86448 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.27■□□□□ 0.19
Trim43bP86448 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
Trim43bP86448 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim43bP86448 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim43bP86448 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43bP86448 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43bP86448 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43bP86448 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43bP86448 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43bP86448 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43bP86448 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43bP86448 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim43bP86448 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.26■□□□□ 0.19
Trim43bP86448 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms