Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
H3f3aP84244 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H3f3aP84244 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
H3f3aP84244 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
H3f3aP84244 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.08□□□□□ -0.16
H3f3aP84244 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
H3f3aP84244 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
H3f3aP84244 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.07□□□□□ -0.16
H3f3aP84244 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
H3f3aP84244 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Gm12497-201ENSMUST00000138778 237 ntBASIC14.07□□□□□ -0.16
H3f3aP84244 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
H3f3aP84244 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
H3f3aP84244 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.06□□□□□ -0.16
H3f3aP84244 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.06□□□□□ -0.16
H3f3aP84244 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.06□□□□□ -0.16
H3f3aP84244 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.06□□□□□ -0.16
H3f3aP84244 Gm7506-201ENSMUST00000207758 815 ntBASIC14.06□□□□□ -0.16
H3f3aP84244 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
H3f3aP84244 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
H3f3aP84244 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.06□□□□□ -0.16
H3f3aP84244 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H3f3aP84244 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
H3f3aP84244 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
H3f3aP84244 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.05□□□□□ -0.16
H3f3aP84244 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H3f3aP84244 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.05□□□□□ -0.16
H3f3aP84244 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms