Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PrkcbP68404 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.08■□□□□ 0.32
PrkcbP68404 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.08■□□□□ 0.32
PrkcbP68404 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PrkcbP68404 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PrkcbP68404 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PrkcbP68404 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.08■□□□□ 0.32
PrkcbP68404 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PrkcbP68404 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PrkcbP68404 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PrkcbP68404 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
PrkcbP68404 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
PrkcbP68404 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.07■□□□□ 0.32
PrkcbP68404 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
PrkcbP68404 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
PrkcbP68404 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
PrkcbP68404 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PrkcbP68404 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.07■□□□□ 0.32
PrkcbP68404 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PrkcbP68404 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PrkcbP68404 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 AV026068-213ENSMUST00000223675 1171 ntBASIC17.06■□□□□ 0.32
PrkcbP68404 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
PrkcbP68404 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.06■□□□□ 0.32
PrkcbP68404 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PrkcbP68404 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PrkcbP68404 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PrkcbP68404 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
PrkcbP68404 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PrkcbP68404 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.05■□□□□ 0.32
PrkcbP68404 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.05■□□□□ 0.32
PrkcbP68404 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Gm19164-201ENSMUST00000210667 640 ntBASIC17.05■□□□□ 0.32
PrkcbP68404 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.05■□□□□ 0.32
PrkcbP68404 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.05■□□□□ 0.32
PrkcbP68404 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.05■□□□□ 0.32
PrkcbP68404 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PrkcbP68404 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PrkcbP68404 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PrkcbP68404 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms