Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Crnkl1P63154 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Crnkl1P63154 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Crnkl1P63154 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Crnkl1P63154 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Crnkl1P63154 Odf3b-204ENSMUST00000227834 930 ntBASIC15.71■□□□□ 0.11
Crnkl1P63154 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Crnkl1P63154 Gm5417-201ENSMUST00000079706 384 ntBASIC15.71■□□□□ 0.11
Crnkl1P63154 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Crnkl1P63154 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Crnkl1P63154 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Crnkl1P63154 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Crnkl1P63154 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Crnkl1P63154 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Crnkl1P63154 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Crnkl1P63154 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Crnkl1P63154 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Crnkl1P63154 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Crnkl1P63154 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.7■□□□□ 0.1
Crnkl1P63154 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Crnkl1P63154 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Crnkl1P63154 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Crnkl1P63154 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Crnkl1P63154 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.69■□□□□ 0.1
Crnkl1P63154 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Crnkl1P63154 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.69■□□□□ 0.1
Crnkl1P63154 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.69■□□□□ 0.1
Crnkl1P63154 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.69■□□□□ 0.1
Crnkl1P63154 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Crnkl1P63154 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.69■□□□□ 0.1
Crnkl1P63154 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.69■□□□□ 0.1
Crnkl1P63154 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Crnkl1P63154 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Crnkl1P63154 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.69■□□□□ 0.1
Crnkl1P63154 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.69■□□□□ 0.1
Crnkl1P63154 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Crnkl1P63154 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.69■□□□□ 0.1
Crnkl1P63154 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.68■□□□□ 0.1
Crnkl1P63154 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.68■□□□□ 0.1
Crnkl1P63154 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Gm12085-201ENSMUST00000119263 940 ntBASIC15.68■□□□□ 0.1
Crnkl1P63154 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.68■□□□□ 0.1
Crnkl1P63154 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.68■□□□□ 0.1
Crnkl1P63154 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Crnkl1P63154 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms