Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Rpl39P62892 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rpl39P62892 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.32□□□□□ -0.6
Rpl39P62892 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC11.32□□□□□ -0.6
Rpl39P62892 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rpl39P62892 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
Rpl39P62892 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.31□□□□□ -0.6
Rpl39P62892 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rpl39P62892 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Rpl39P62892 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.31□□□□□ -0.6
Rpl39P62892 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.31□□□□□ -0.6
Rpl39P62892 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.31□□□□□ -0.6
Rpl39P62892 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 BC037039-201ENSMUST00000192003 2205 ntBASIC11.31□□□□□ -0.6
Rpl39P62892 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rpl39P62892 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Rpl39P62892 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.31□□□□□ -0.6
Rpl39P62892 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rpl39P62892 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.3□□□□□ -0.6
Rpl39P62892 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.3□□□□□ -0.6
Rpl39P62892 Gm10698-201ENSMUST00000182663 604 ntBASIC11.3□□□□□ -0.6
Rpl39P62892 Gm37856-201ENSMUST00000191634 999 ntBASIC11.3□□□□□ -0.6
Rpl39P62892 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rpl39P62892 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.3□□□□□ -0.6
Rpl39P62892 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rpl39P62892 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rpl39P62892 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.29□□□□□ -0.6
Rpl39P62892 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.29□□□□□ -0.6
Rpl39P62892 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rpl39P62892 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms