Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdsp1P58466 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdsp1P58466 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdsp1P58466 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ctdsp1P58466 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdsp1P58466 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ctdsp1P58466 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.42□□□□□ -0.42
Ctdsp1P58466 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.42□□□□□ -0.42
Ctdsp1P58466 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Nespas-201ENSMUST00000143738 1083 ntBASIC12.42□□□□□ -0.42
Ctdsp1P58466 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ctdsp1P58466 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.41□□□□□ -0.42
Ctdsp1P58466 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Gm45102-201ENSMUST00000207427 857 ntBASIC12.41□□□□□ -0.42
Ctdsp1P58466 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.41□□□□□ -0.42
Ctdsp1P58466 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.41□□□□□ -0.42
Ctdsp1P58466 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ctdsp1P58466 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ctdsp1P58466 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Rps24-207ENSMUST00000224568 714 ntBASIC12.4□□□□□ -0.42
Ctdsp1P58466 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ctdsp1P58466 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ctdsp1P58466 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ctdsp1P58466 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms