Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ccr4P51680 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccr4P51680 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccr4P51680 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccr4P51680 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccr4P51680 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Ccr4P51680 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccr4P51680 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccr4P51680 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccr4P51680 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.68□□□□□ -0.06
Ccr4P51680 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccr4P51680 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccr4P51680 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccr4P51680 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.68□□□□□ -0.06
Ccr4P51680 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccr4P51680 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccr4P51680 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccr4P51680 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccr4P51680 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccr4P51680 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccr4P51680 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccr4P51680 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ccr4P51680 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ccr4P51680 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.67□□□□□ -0.06
Ccr4P51680 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.67□□□□□ -0.06
Ccr4P51680 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ccr4P51680 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Ccr4P51680 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.67□□□□□ -0.06
Ccr4P51680 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Ccr4P51680 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccr4P51680 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Ccr4P51680 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccr4P51680 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.66□□□□□ -0.06
Ccr4P51680 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Ccr4P51680 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccr4P51680 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Ccr4P51680 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccr4P51680 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.66□□□□□ -0.06
Ccr4P51680 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ccr4P51680 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ccr4P51680 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccr4P51680 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ccr4P51680 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccr4P51680 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccr4P51680 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccr4P51680 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccr4P51680 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccr4P51680 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ccr4P51680 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccr4P51680 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ccr4P51680 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ccr4P51680 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.65□□□□□ -0.06
Ccr4P51680 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms