Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sftpa1P35242 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sftpa1P35242 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.57□□□□□ -0.08
Sftpa1P35242 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Sftpa1P35242 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sftpa1P35242 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sftpa1P35242 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sftpa1P35242 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sftpa1P35242 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sftpa1P35242 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sftpa1P35242 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Sftpa1P35242 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.57□□□□□ -0.08
Sftpa1P35242 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sftpa1P35242 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sftpa1P35242 Gm11745-201ENSMUST00000121669 448 ntBASIC14.57□□□□□ -0.08
Sftpa1P35242 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sftpa1P35242 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.57□□□□□ -0.08
Sftpa1P35242 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sftpa1P35242 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sftpa1P35242 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sftpa1P35242 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.57□□□□□ -0.08
Sftpa1P35242 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sftpa1P35242 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Sftpa1P35242 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sftpa1P35242 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sftpa1P35242 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sftpa1P35242 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sftpa1P35242 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Sftpa1P35242 Gm15427-201ENSMUST00000117288 531 ntBASIC14.56□□□□□ -0.08
Sftpa1P35242 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.56□□□□□ -0.08
Sftpa1P35242 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.56□□□□□ -0.08
Sftpa1P35242 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Gm5177-201ENSMUST00000183092 997 ntBASIC14.56□□□□□ -0.08
Sftpa1P35242 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.56□□□□□ -0.08
Sftpa1P35242 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Sftpa1P35242 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.56□□□□□ -0.08
Sftpa1P35242 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sftpa1P35242 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sftpa1P35242 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.55□□□□□ -0.08
Sftpa1P35242 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.55□□□□□ -0.08
Sftpa1P35242 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.55□□□□□ -0.08
Sftpa1P35242 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.55□□□□□ -0.08
Sftpa1P35242 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.55□□□□□ -0.08
Sftpa1P35242 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sftpa1P35242 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sftpa1P35242 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
Sftpa1P35242 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sftpa1P35242 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sftpa1P35242 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.55□□□□□ -0.08
Sftpa1P35242 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Sftpa1P35242 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Sftpa1P35242 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sftpa1P35242 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.55□□□□□ -0.08
Sftpa1P35242 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sftpa1P35242 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.55□□□□□ -0.08
Sftpa1P35242 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sftpa1P35242 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sftpa1P35242 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms