Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2aP08775 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2aP08775 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2aP08775 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2aP08775 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.91■□□□□ 0.46
Polr2aP08775 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Polr2aP08775 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2aP08775 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2aP08775 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2aP08775 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2aP08775 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2aP08775 Gm12490-201ENSMUST00000120255 560 ntBASIC17.9■□□□□ 0.46
Polr2aP08775 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.9■□□□□ 0.46
Polr2aP08775 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2aP08775 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2aP08775 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2aP08775 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2aP08775 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2aP08775 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Polr2aP08775 Haglr-201ENSMUST00000100000 2085 ntBASIC17.9■□□□□ 0.46
Polr2aP08775 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.9■□□□□ 0.46
Polr2aP08775 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Polr2aP08775 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.9■□□□□ 0.46
Polr2aP08775 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2aP08775 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Polr2aP08775 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Polr2aP08775 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Polr2aP08775 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.89■□□□□ 0.45
Polr2aP08775 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr2aP08775 Gm44855-201ENSMUST00000205725 362 ntBASIC17.89■□□□□ 0.45
Polr2aP08775 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.89■□□□□ 0.45
Polr2aP08775 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Polr2aP08775 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr2aP08775 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr2aP08775 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr2aP08775 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Polr2aP08775 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr2aP08775 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr2aP08775 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr2aP08775 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.89■□□□□ 0.45
Polr2aP08775 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Polr2aP08775 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.88■□□□□ 0.45
Polr2aP08775 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr2aP08775 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr2aP08775 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.88■□□□□ 0.45
Polr2aP08775 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr2aP08775 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr2aP08775 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Polr2aP08775 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.88■□□□□ 0.45
Polr2aP08775 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.88■□□□□ 0.45
Polr2aP08775 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr2aP08775 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Polr2aP08775 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Polr2aP08775 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr2aP08775 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Polr2aP08775 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr2aP08775 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr2aP08775 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr2aP08775 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr2aP08775 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Polr2aP08775 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr2aP08775 Gm7488-201ENSMUST00000117148 684 ntBASIC17.88■□□□□ 0.45
Polr2aP08775 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.88■□□□□ 0.45
Polr2aP08775 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.88■□□□□ 0.45
Polr2aP08775 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.88■□□□□ 0.45
Polr2aP08775 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr2aP08775 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.87■□□□□ 0.45
Polr2aP08775 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Polr2aP08775 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Polr2aP08775 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Polr2aP08775 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Polr2aP08775 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.87■□□□□ 0.45
Polr2aP08775 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Polr2aP08775 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Polr2aP08775 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.87■□□□□ 0.45
Polr2aP08775 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Polr2aP08775 Gm14127-201ENSMUST00000117906 678 ntBASIC17.87■□□□□ 0.45
Polr2aP08775 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Polr2aP08775 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Polr2aP08775 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Polr2aP08775 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Polr2aP08775 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Polr2aP08775 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.87■□□□□ 0.45
Polr2aP08775 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Polr2aP08775 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Polr2aP08775 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Polr2aP08775 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr2aP08775 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.86■□□□□ 0.45
Polr2aP08775 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Polr2aP08775 Gm14722-201ENSMUST00000118943 689 ntBASIC17.86■□□□□ 0.45
Polr2aP08775 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Polr2aP08775 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.86■□□□□ 0.45
Polr2aP08775 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr2aP08775 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr2aP08775 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr2aP08775 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr2aP08775 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Polr2aP08775 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr2aP08775 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr2aP08775 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms