Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm7506-201ENSMUST00000207758 815 ntBASIC13.26□□□□□ -0.29
Hoxa3P02831 AW822252-206ENSMUST00000208904 237 ntBASIC13.26□□□□□ -0.29
Hoxa3P02831 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.26□□□□□ -0.29
Hoxa3P02831 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxa3P02831 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hoxa3P02831 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hoxa3P02831 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.26□□□□□ -0.29
Hoxa3P02831 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxa3P02831 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.26□□□□□ -0.29
Hoxa3P02831 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hoxa3P02831 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxa3P02831 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hoxa3P02831 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.25□□□□□ -0.29
Hoxa3P02831 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Hoxa3P02831 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.25□□□□□ -0.29
Hoxa3P02831 Gm6376-201ENSMUST00000209407 580 ntBASIC13.25□□□□□ -0.29
Hoxa3P02831 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxa3P02831 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.25□□□□□ -0.29
Hoxa3P02831 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxa3P02831 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Hoxa3P02831 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.24□□□□□ -0.29
Hoxa3P02831 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Hoxa3P02831 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.24□□□□□ -0.29
Hoxa3P02831 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.24□□□□□ -0.29
Hoxa3P02831 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.24□□□□□ -0.29
Hoxa3P02831 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.24□□□□□ -0.29
Hoxa3P02831 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.24□□□□□ -0.29
Hoxa3P02831 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Hoxa3P02831 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Hoxa3P02831 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxa3P02831 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Hoxa3P02831 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.23□□□□□ -0.29
Hoxa3P02831 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.23□□□□□ -0.29
Hoxa3P02831 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxa3P02831 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms