Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hdac3O88895 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hdac3O88895 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac3O88895 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hdac3O88895 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac3O88895 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac3O88895 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac3O88895 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac3O88895 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac3O88895 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.18□□□□□ -0.14
Hdac3O88895 Gm6659-201ENSMUST00000174752 547 ntBASIC14.18□□□□□ -0.14
Hdac3O88895 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.18□□□□□ -0.14
Hdac3O88895 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Hdac3O88895 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac3O88895 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.18□□□□□ -0.14
Hdac3O88895 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac3O88895 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac3O88895 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac3O88895 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac3O88895 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hdac3O88895 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
Hdac3O88895 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac3O88895 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hdac3O88895 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Hdac3O88895 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hdac3O88895 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.17□□□□□ -0.14
Hdac3O88895 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Gm36967-201ENSMUST00000193814 266 ntBASIC14.17□□□□□ -0.14
Hdac3O88895 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.17□□□□□ -0.14
Hdac3O88895 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hdac3O88895 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Hdac3O88895 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hdac3O88895 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hdac3O88895 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.16□□□□□ -0.14
Hdac3O88895 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.16□□□□□ -0.14
Hdac3O88895 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Hdac3O88895 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.16□□□□□ -0.14
Hdac3O88895 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.16□□□□□ -0.14
Hdac3O88895 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hdac3O88895 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hdac3O88895 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.15□□□□□ -0.14
Hdac3O88895 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hdac3O88895 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hdac3O88895 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.15□□□□□ -0.14
Hdac3O88895 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.15□□□□□ -0.14
Hdac3O88895 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.15□□□□□ -0.14
Hdac3O88895 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.15□□□□□ -0.14
Hdac3O88895 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hdac3O88895 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.15□□□□□ -0.14
Hdac3O88895 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.15□□□□□ -0.14
Hdac3O88895 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hdac3O88895 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms