Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
CcnkO88874 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.11□□□□□ -0.15
CcnkO88874 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CcnkO88874 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CcnkO88874 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
CcnkO88874 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Sybu-209ENSMUST00000228639 4113 ntBASIC14.1□□□□□ -0.15
CcnkO88874 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.1□□□□□ -0.15
CcnkO88874 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.1□□□□□ -0.15
CcnkO88874 Gm11539-201ENSMUST00000119837 557 ntBASIC14.1□□□□□ -0.15
CcnkO88874 Gm13436-201ENSMUST00000120418 567 ntBASIC14.1□□□□□ -0.15
CcnkO88874 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.1□□□□□ -0.15
CcnkO88874 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CcnkO88874 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.1□□□□□ -0.15
CcnkO88874 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcnkO88874 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Gm13559-201ENSMUST00000120476 863 ntBASIC14.09□□□□□ -0.15
CcnkO88874 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.09□□□□□ -0.15
CcnkO88874 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CcnkO88874 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CcnkO88874 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CcnkO88874 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.09□□□□□ -0.15
CcnkO88874 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcnkO88874 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.08□□□□□ -0.15
CcnkO88874 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CcnkO88874 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.08□□□□□ -0.16
CcnkO88874 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CcnkO88874 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CcnkO88874 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CcnkO88874 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CcnkO88874 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CcnkO88874 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.08□□□□□ -0.16
CcnkO88874 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.08□□□□□ -0.16
CcnkO88874 Gm7370-201ENSMUST00000219471 767 ntBASIC14.08□□□□□ -0.16
CcnkO88874 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.08□□□□□ -0.16
CcnkO88874 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CcnkO88874 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CcnkO88874 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CcnkO88874 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CcnkO88874 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CcnkO88874 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CcnkO88874 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CcnkO88874 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CcnkO88874 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CcnkO88874 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CcnkO88874 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms