Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Best1O88870 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.17■□□□□ 0.02
Best1O88870 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.17■□□□□ 0.02
Best1O88870 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Best1O88870 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.17■□□□□ 0.02
Best1O88870 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Best1O88870 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Best1O88870 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.16■□□□□ 0.02
Best1O88870 Gm9682-201ENSMUST00000197505 556 ntBASIC15.16■□□□□ 0.02
Best1O88870 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.16■□□□□ 0.02
Best1O88870 Gm7787-201ENSMUST00000216858 688 ntBASIC15.16■□□□□ 0.02
Best1O88870 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.16■□□□□ 0.02
Best1O88870 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.16■□□□□ 0.02
Best1O88870 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.16■□□□□ 0.02
Best1O88870 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Best1O88870 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.16■□□□□ 0.02
Best1O88870 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.16■□□□□ 0.02
Best1O88870 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Best1O88870 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Best1O88870 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Best1O88870 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Best1O88870 Gm9727-201ENSMUST00000161387 555 ntBASIC15.15■□□□□ 0.02
Best1O88870 Gm45167-201ENSMUST00000208007 322 ntBASIC15.15■□□□□ 0.02
Best1O88870 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Best1O88870 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.15■□□□□ 0.02
Best1O88870 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.15■□□□□ 0.02
Best1O88870 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Best1O88870 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Best1O88870 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.14■□□□□ 0.01
Best1O88870 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Best1O88870 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Best1O88870 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Best1O88870 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Best1O88870 Gm8000-201ENSMUST00000188378 592 ntBASIC15.14■□□□□ 0.01
Best1O88870 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.14■□□□□ 0.01
Best1O88870 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.14■□□□□ 0.01
Best1O88870 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Best1O88870 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms