Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ClppO88696 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.41■□□□□ 0.06
ClppO88696 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ClppO88696 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ClppO88696 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ClppO88696 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ClppO88696 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ClppO88696 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.4■□□□□ 0.06
ClppO88696 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.4■□□□□ 0.06
ClppO88696 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.4■□□□□ 0.06
ClppO88696 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.4■□□□□ 0.06
ClppO88696 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
ClppO88696 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
ClppO88696 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
ClppO88696 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClppO88696 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
ClppO88696 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClppO88696 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClppO88696 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ClppO88696 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ClppO88696 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.39■□□□□ 0.05
ClppO88696 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ClppO88696 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClppO88696 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.39■□□□□ 0.05
ClppO88696 Gm11452-201ENSMUST00000122376 690 ntBASIC15.39■□□□□ 0.05
ClppO88696 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.39■□□□□ 0.05
ClppO88696 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.39■□□□□ 0.05
ClppO88696 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClppO88696 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ClppO88696 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.39■□□□□ 0.05
ClppO88696 Gm6376-201ENSMUST00000209407 580 ntBASIC15.39■□□□□ 0.05
ClppO88696 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.39■□□□□ 0.05
ClppO88696 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ClppO88696 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ClppO88696 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClppO88696 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClppO88696 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ClppO88696 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.39■□□□□ 0.05
ClppO88696 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClppO88696 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ClppO88696 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClppO88696 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
ClppO88696 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ClppO88696 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ClppO88696 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ClppO88696 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.38■□□□□ 0.05
ClppO88696 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.38■□□□□ 0.05
ClppO88696 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.38■□□□□ 0.05
ClppO88696 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ClppO88696 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.38■□□□□ 0.05
ClppO88696 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.38■□□□□ 0.05
ClppO88696 Gm7862-201ENSMUST00000121461 292 ntBASIC15.38■□□□□ 0.05
ClppO88696 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ClppO88696 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ClppO88696 Gm27867-201ENSMUST00000184778 125 ntBASIC15.38■□□□□ 0.05
ClppO88696 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ClppO88696 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.38■□□□□ 0.05
ClppO88696 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.38■□□□□ 0.05
ClppO88696 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms