Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.32□□□□□ -0.12
Lmx1bO88609 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.32□□□□□ -0.12
Lmx1bO88609 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Lmx1bO88609 Gm4459-201ENSMUST00000118750 468 ntBASIC14.32□□□□□ -0.12
Lmx1bO88609 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.32□□□□□ -0.12
Lmx1bO88609 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.32□□□□□ -0.12
Lmx1bO88609 Gm10060-201ENSMUST00000212002 111 ntBASIC14.32□□□□□ -0.12
Lmx1bO88609 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lmx1bO88609 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.32□□□□□ -0.12
Lmx1bO88609 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.32□□□□□ -0.12
Lmx1bO88609 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lmx1bO88609 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.31□□□□□ -0.12
Lmx1bO88609 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.31□□□□□ -0.12
Lmx1bO88609 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Lmx1bO88609 Gm18206-201ENSMUST00000207027 926 ntBASIC14.31□□□□□ -0.12
Lmx1bO88609 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lmx1bO88609 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.31□□□□□ -0.12
Lmx1bO88609 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Gm8097-201ENSMUST00000117903 829 ntBASIC14.3□□□□□ -0.12
Lmx1bO88609 Gm15173-201ENSMUST00000122049 433 ntBASIC14.3□□□□□ -0.12
Lmx1bO88609 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Gm4535-201ENSMUST00000182274 558 ntBASIC14.3□□□□□ -0.12
Lmx1bO88609 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.3□□□□□ -0.12
Lmx1bO88609 Gm27525-201ENSMUST00000184465 107 ntBASIC14.3□□□□□ -0.12
Lmx1bO88609 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Gm10355-201ENSMUST00000097146 517 ntBASIC14.3□□□□□ -0.12
Lmx1bO88609 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.3□□□□□ -0.12
Lmx1bO88609 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lmx1bO88609 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lmx1bO88609 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lmx1bO88609 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Gm25990-201ENSMUST00000102440 86 ntBASIC14.29□□□□□ -0.12
Lmx1bO88609 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.29□□□□□ -0.12
Lmx1bO88609 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lmx1bO88609 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.29□□□□□ -0.12
Lmx1bO88609 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.29□□□□□ -0.12
Lmx1bO88609 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.29□□□□□ -0.12
Lmx1bO88609 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.29□□□□□ -0.12
Lmx1bO88609 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms