Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cops6O88545 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cops6O88545 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cops6O88545 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cops6O88545 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cops6O88545 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cops6O88545 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.26■□□□□ 0.67
Cops6O88545 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cops6O88545 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Cops6O88545 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cops6O88545 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cops6O88545 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cops6O88545 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cops6O88545 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cops6O88545 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cops6O88545 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cops6O88545 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.26■□□□□ 0.67
Cops6O88545 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cops6O88545 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cops6O88545 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cops6O88545 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.25■□□□□ 0.67
Cops6O88545 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.25■□□□□ 0.67
Cops6O88545 Gm17968-201ENSMUST00000194902 784 ntBASIC19.25■□□□□ 0.67
Cops6O88545 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cops6O88545 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Cops6O88545 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cops6O88545 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cops6O88545 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cops6O88545 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cops6O88545 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cops6O88545 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC19.24■□□□□ 0.67
Cops6O88545 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.24■□□□□ 0.67
Cops6O88545 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Cops6O88545 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Cops6O88545 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cops6O88545 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cops6O88545 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.24■□□□□ 0.67
Cops6O88545 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cops6O88545 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cops6O88545 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Cops6O88545 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC19.23■□□□□ 0.67
Cops6O88545 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.23■□□□□ 0.67
Cops6O88545 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Cops6O88545 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.23■□□□□ 0.67
Cops6O88545 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Cops6O88545 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cops6O88545 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.22■□□□□ 0.67
Cops6O88545 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops6O88545 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.22■□□□□ 0.67
Cops6O88545 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Cops6O88545 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops6O88545 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cops6O88545 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops6O88545 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cops6O88545 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cops6O88545 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms