Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.21□□□□□ -0.13
Cops3O88543 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cops3O88543 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.21□□□□□ -0.13
Cops3O88543 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cops3O88543 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cops3O88543 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cops3O88543 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.21□□□□□ -0.14
Cops3O88543 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Cops3O88543 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cops3O88543 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.2□□□□□ -0.14
Cops3O88543 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Cops3O88543 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cops3O88543 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.2□□□□□ -0.14
Cops3O88543 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Cops3O88543 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cops3O88543 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cops3O88543 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cops3O88543 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Cops3O88543 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Cops3O88543 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cops3O88543 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.19□□□□□ -0.14
Cops3O88543 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Cops3O88543 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.19□□□□□ -0.14
Cops3O88543 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.19□□□□□ -0.14
Cops3O88543 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.19□□□□□ -0.14
Cops3O88543 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.19□□□□□ -0.14
Cops3O88543 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Cops3O88543 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.19□□□□□ -0.14
Cops3O88543 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cops3O88543 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cops3O88543 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.18□□□□□ -0.14
Cops3O88543 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Cops3O88543 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.18□□□□□ -0.14
Cops3O88543 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cops3O88543 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.18□□□□□ -0.14
Cops3O88543 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.18□□□□□ -0.14
Cops3O88543 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.18□□□□□ -0.14
Cops3O88543 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cops3O88543 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Cops3O88543 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.18□□□□□ -0.14
Cops3O88543 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cops3O88543 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms