Protein–RNA interactions for Protein: O88410

Cxcr3, C-X-C chemokine receptor type 3, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr3O88410 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Cxcr3O88410 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcr3O88410 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cxcr3O88410 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cxcr3O88410 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cxcr3O88410 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Cxcr3O88410 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.85■□□□□ 0.13
Cxcr3O88410 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Cxcr3O88410 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cxcr3O88410 Gm6257-201ENSMUST00000163864 910 ntBASIC15.85■□□□□ 0.13
Cxcr3O88410 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.85■□□□□ 0.13
Cxcr3O88410 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cxcr3O88410 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.85■□□□□ 0.13
Cxcr3O88410 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Cxcr3O88410 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cxcr3O88410 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Cxcr3O88410 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.85■□□□□ 0.13
Cxcr3O88410 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcr3O88410 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcr3O88410 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcr3O88410 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cxcr3O88410 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cxcr3O88410 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.84■□□□□ 0.13
Cxcr3O88410 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcr3O88410 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.84■□□□□ 0.13
Cxcr3O88410 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcr3O88410 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.84■□□□□ 0.13
Cxcr3O88410 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.84■□□□□ 0.13
Cxcr3O88410 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.84■□□□□ 0.13
Cxcr3O88410 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcr3O88410 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.84■□□□□ 0.13
Cxcr3O88410 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcr3O88410 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcr3O88410 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.84■□□□□ 0.13
Cxcr3O88410 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcr3O88410 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcr3O88410 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcr3O88410 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Cxcr3O88410 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcr3O88410 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcr3O88410 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cxcr3O88410 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cxcr3O88410 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cxcr3O88410 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cxcr3O88410 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cxcr3O88410 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcr3O88410 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcr3O88410 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcr3O88410 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Cxcr3O88410 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcr3O88410 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.83■□□□□ 0.12
Cxcr3O88410 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.83■□□□□ 0.12
Cxcr3O88410 Gm8655-201ENSMUST00000221159 852 ntBASIC15.83■□□□□ 0.12
Cxcr3O88410 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcr3O88410 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcr3O88410 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcr3O88410 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcr3O88410 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cxcr3O88410 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcr3O88410 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cxcr3O88410 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.83■□□□□ 0.12
Cxcr3O88410 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcr3O88410 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcr3O88410 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcr3O88410 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcr3O88410 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.82■□□□□ 0.12
Cxcr3O88410 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcr3O88410 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cxcr3O88410 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcr3O88410 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcr3O88410 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcr3O88410 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcr3O88410 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcr3O88410 Gm6376-201ENSMUST00000209407 580 ntBASIC15.82■□□□□ 0.12
Cxcr3O88410 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcr3O88410 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.82■□□□□ 0.12
Cxcr3O88410 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcr3O88410 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcr3O88410 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.82■□□□□ 0.12
Cxcr3O88410 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Cxcr3O88410 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cxcr3O88410 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms