Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfdp1O88271 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cfdp1O88271 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Cfdp1O88271 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Gm12350-201ENSMUST00000121208 462 ntBASIC19.68■□□□□ 0.74
Cfdp1O88271 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.68■□□□□ 0.74
Cfdp1O88271 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.68■□□□□ 0.74
Cfdp1O88271 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Cfdp1O88271 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.68■□□□□ 0.74
Cfdp1O88271 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cfdp1O88271 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfdp1O88271 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfdp1O88271 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Cfdp1O88271 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cfdp1O88271 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfdp1O88271 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cfdp1O88271 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfdp1O88271 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfdp1O88271 Gm27646-201ENSMUST00000183989 110 ntBASIC19.67■□□□□ 0.74
Cfdp1O88271 Gm6550-201ENSMUST00000187574 993 ntBASIC19.67■□□□□ 0.74
Cfdp1O88271 Gm6443-201ENSMUST00000203599 874 ntBASIC19.67■□□□□ 0.74
Cfdp1O88271 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfdp1O88271 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Cfdp1O88271 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.67■□□□□ 0.74
Cfdp1O88271 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfdp1O88271 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cfdp1O88271 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfdp1O88271 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfdp1O88271 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cfdp1O88271 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.66■□□□□ 0.74
Cfdp1O88271 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.66■□□□□ 0.74
Cfdp1O88271 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cfdp1O88271 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.66■□□□□ 0.74
Cfdp1O88271 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cfdp1O88271 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.66■□□□□ 0.74
Cfdp1O88271 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.66■□□□□ 0.74
Cfdp1O88271 Grk6-207ENSMUST00000225925 2769 ntBASIC19.66■□□□□ 0.74
Cfdp1O88271 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cfdp1O88271 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.65■□□□□ 0.74
Cfdp1O88271 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.65■□□□□ 0.74
Cfdp1O88271 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.65■□□□□ 0.74
Cfdp1O88271 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.65■□□□□ 0.74
Cfdp1O88271 AW822252-206ENSMUST00000208904 237 ntBASIC19.65■□□□□ 0.74
Cfdp1O88271 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.65■□□□□ 0.74
Cfdp1O88271 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.65■□□□□ 0.74
Cfdp1O88271 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cfdp1O88271 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cfdp1O88271 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cfdp1O88271 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cfdp1O88271 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Cfdp1O88271 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms