Protein–RNA interactions for Protein: O55144

Tlx3, T-cell leukemia homeobox protein 3, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlx3O55144 Gm44335-201ENSMUST00000196879 141 ntBASIC15.14■□□□□ 0.01
Tlx3O55144 Gm44297-201ENSMUST00000198304 141 ntBASIC15.14■□□□□ 0.01
Tlx3O55144 Gm44346-201ENSMUST00000198851 141 ntBASIC15.14■□□□□ 0.01
Tlx3O55144 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tlx3O55144 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlx3O55144 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Tlx3O55144 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlx3O55144 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlx3O55144 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tlx3O55144 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlx3O55144 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Tlx3O55144 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlx3O55144 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tlx3O55144 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tlx3O55144 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Tlx3O55144 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.14■□□□□ 0.01
Tlx3O55144 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Tlx3O55144 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.13■□□□□ 0.01
Tlx3O55144 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.13■□□□□ 0.01
Tlx3O55144 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tlx3O55144 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.13■□□□□ 0.01
Tlx3O55144 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.13■□□□□ 0.01
Tlx3O55144 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tlx3O55144 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Tlx3O55144 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.13■□□□□ 0.01
Tlx3O55144 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tlx3O55144 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tlx3O55144 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.12■□□□□ 0.01
Tlx3O55144 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tlx3O55144 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Gm13597-201ENSMUST00000121239 375 ntBASIC15.12■□□□□ 0.01
Tlx3O55144 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.12■□□□□ 0.01
Tlx3O55144 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.12■□□□□ 0.01
Tlx3O55144 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.12■□□□□ 0.01
Tlx3O55144 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.12■□□□□ 0.01
Tlx3O55144 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.12■□□□□ 0.01
Tlx3O55144 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tlx3O55144 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Tlx3O55144 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Tlx3O55144 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tlx3O55144 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlx3O55144 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlx3O55144 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tlx3O55144 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlx3O55144 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlx3O55144 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlx3O55144 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlx3O55144 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlx3O55144 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tlx3O55144 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.11■□□□□ 0.01
Tlx3O55144 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.11■□□□□ 0.01
Tlx3O55144 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tlx3O55144 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 Gm4518-201ENSMUST00000182638 718 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.11■□□□□ 0.01
Tlx3O55144 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.11■□□□□ 0.01
Tlx3O55144 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tlx3O55144 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.11■□□□□ 0.01
Tlx3O55144 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms