Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SncaO55042 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SncaO55042 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
SncaO55042 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SncaO55042 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SncaO55042 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.11□□□□□ -0.31
SncaO55042 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SncaO55042 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SncaO55042 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
SncaO55042 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.11□□□□□ -0.31
SncaO55042 Gm13436-201ENSMUST00000120418 567 ntBASIC13.11□□□□□ -0.31
SncaO55042 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.11□□□□□ -0.31
SncaO55042 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Mir5130-201ENSMUST00000175160 84 ntBASIC13.11□□□□□ -0.31
SncaO55042 Mir1668-201ENSMUST00000184114 107 ntBASIC13.11□□□□□ -0.31
SncaO55042 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.11□□□□□ -0.31
SncaO55042 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.11□□□□□ -0.31
SncaO55042 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.11□□□□□ -0.31
SncaO55042 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.11□□□□□ -0.31
SncaO55042 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SncaO55042 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SncaO55042 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.1□□□□□ -0.31
SncaO55042 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
SncaO55042 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SncaO55042 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.1□□□□□ -0.31
SncaO55042 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.1□□□□□ -0.31
SncaO55042 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.1□□□□□ -0.31
SncaO55042 Gm27011-201ENSMUST00000182352 972 ntBASIC13.1□□□□□ -0.31
SncaO55042 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
SncaO55042 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.1□□□□□ -0.31
SncaO55042 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SncaO55042 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SncaO55042 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms