Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Per2O54943 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Per2O54943 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.5■□□□□ 0.23
Per2O54943 Gm13312-201ENSMUST00000119631 718 ntBASIC16.5■□□□□ 0.23
Per2O54943 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.5■□□□□ 0.23
Per2O54943 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Per2O54943 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Per2O54943 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Per2O54943 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Per2O54943 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Per2O54943 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Per2O54943 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Per2O54943 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Per2O54943 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Per2O54943 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Per2O54943 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.5■□□□□ 0.23
Per2O54943 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Per2O54943 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Per2O54943 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Per2O54943 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Per2O54943 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.49■□□□□ 0.23
Per2O54943 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Per2O54943 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.49■□□□□ 0.23
Per2O54943 Gm6257-201ENSMUST00000163864 910 ntBASIC16.49■□□□□ 0.23
Per2O54943 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Per2O54943 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.49■□□□□ 0.23
Per2O54943 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Per2O54943 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Per2O54943 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Per2O54943 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Per2O54943 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Per2O54943 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Per2O54943 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Per2O54943 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Per2O54943 App-207ENSMUST00000227737 2827 ntBASIC16.48■□□□□ 0.23
Per2O54943 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Per2O54943 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Per2O54943 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.48■□□□□ 0.23
Per2O54943 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Per2O54943 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Per2O54943 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Per2O54943 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per2O54943 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per2O54943 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per2O54943 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per2O54943 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.47■□□□□ 0.23
Per2O54943 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per2O54943 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per2O54943 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Per2O54943 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Per2O54943 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.47■□□□□ 0.23
Per2O54943 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Per2O54943 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per2O54943 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per2O54943 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Per2O54943 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Per2O54943 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per2O54943 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per2O54943 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Per2O54943 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.47■□□□□ 0.23
Per2O54943 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per2O54943 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per2O54943 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Per2O54943 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per2O54943 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per2O54943 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Per2O54943 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Per2O54943 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per2O54943 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per2O54943 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Per2O54943 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.46■□□□□ 0.23
Per2O54943 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.46■□□□□ 0.23
Per2O54943 Rprl3-201ENSMUST00000157400 290 ntBASIC16.46■□□□□ 0.23
Per2O54943 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.46■□□□□ 0.23
Per2O54943 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.46■□□□□ 0.23
Per2O54943 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Per2O54943 Gm27742-201ENSMUST00000184667 60 ntBASIC16.46■□□□□ 0.23
Per2O54943 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per2O54943 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per2O54943 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Per2O54943 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per2O54943 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms