Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn5O54942 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.41■□□□□ 0.22
Cldn5O54942 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Cldn5O54942 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn5O54942 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Cldn5O54942 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn5O54942 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn5O54942 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn5O54942 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.41■□□□□ 0.22
Cldn5O54942 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cldn5O54942 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn5O54942 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cldn5O54942 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn5O54942 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldn5O54942 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cldn5O54942 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.4■□□□□ 0.22
Cldn5O54942 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cldn5O54942 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Cldn5O54942 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 Gm8344-201ENSMUST00000119813 856 ntBASIC16.4■□□□□ 0.22
Cldn5O54942 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.4■□□□□ 0.22
Cldn5O54942 Gm27525-201ENSMUST00000184465 107 ntBASIC16.4■□□□□ 0.22
Cldn5O54942 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
Cldn5O54942 Gm18206-201ENSMUST00000207027 926 ntBASIC16.4■□□□□ 0.22
Cldn5O54942 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
Cldn5O54942 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.4■□□□□ 0.22
Cldn5O54942 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.4■□□□□ 0.22
Cldn5O54942 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.4■□□□□ 0.22
Cldn5O54942 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cldn5O54942 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.4■□□□□ 0.22
Cldn5O54942 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Cldn5O54942 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cldn5O54942 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn5O54942 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.4■□□□□ 0.22
Cldn5O54942 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Cldn5O54942 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn5O54942 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cldn5O54942 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn5O54942 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn5O54942 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn5O54942 Gm1401-201ENSMUST00000122048 772 ntBASIC16.39■□□□□ 0.21
Cldn5O54942 Gm43514-201ENSMUST00000198852 424 ntBASIC16.39■□□□□ 0.21
Cldn5O54942 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.39■□□□□ 0.21
Cldn5O54942 AV026068-213ENSMUST00000223675 1171 ntBASIC16.39■□□□□ 0.21
Cldn5O54942 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn5O54942 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn5O54942 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn5O54942 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn5O54942 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn5O54942 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn5O54942 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn5O54942 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.39■□□□□ 0.21
Cldn5O54942 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn5O54942 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn5O54942 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn5O54942 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn5O54942 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.38■□□□□ 0.21
Cldn5O54942 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn5O54942 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn5O54942 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn5O54942 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cldn5O54942 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn5O54942 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn5O54942 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn5O54942 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn5O54942 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn5O54942 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.38■□□□□ 0.21
Cldn5O54942 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.38■□□□□ 0.21
Cldn5O54942 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn5O54942 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Cldn5O54942 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn5O54942 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn5O54942 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn5O54942 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cldn5O54942 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.37■□□□□ 0.21
Cldn5O54942 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn5O54942 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn5O54942 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cldn5O54942 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn5O54942 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn5O54942 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn5O54942 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn5O54942 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn5O54942 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn5O54942 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms