Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Npc1O35604 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.43■□□□□ 0.06
Npc1O35604 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Npc1O35604 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Npc1O35604 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Npc1O35604 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Npc1O35604 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Npc1O35604 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.43■□□□□ 0.06
Npc1O35604 Gm12497-201ENSMUST00000138778 237 ntBASIC15.43■□□□□ 0.06
Npc1O35604 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.43■□□□□ 0.06
Npc1O35604 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Npc1O35604 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.43■□□□□ 0.06
Npc1O35604 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Npc1O35604 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.43■□□□□ 0.06
Npc1O35604 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Npc1O35604 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Npc1O35604 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Npc1O35604 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Npc1O35604 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Npc1O35604 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Npc1O35604 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Npc1O35604 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Npc1O35604 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.42■□□□□ 0.06
Npc1O35604 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.42■□□□□ 0.06
Npc1O35604 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Npc1O35604 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.42■□□□□ 0.06
Npc1O35604 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.42■□□□□ 0.06
Npc1O35604 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Gm25406-201ENSMUST00000157599 105 ntBASIC15.42■□□□□ 0.06
Npc1O35604 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.42■□□□□ 0.06
Npc1O35604 Gm25745-201ENSMUST00000174945 133 ntBASIC15.42■□□□□ 0.06
Npc1O35604 Gm18195-201ENSMUST00000207604 706 ntBASIC15.42■□□□□ 0.06
Npc1O35604 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Npc1O35604 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.42■□□□□ 0.06
Npc1O35604 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.42■□□□□ 0.06
Npc1O35604 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Npc1O35604 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
Npc1O35604 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.41■□□□□ 0.06
Npc1O35604 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Npc1O35604 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.41■□□□□ 0.06
Npc1O35604 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Npc1O35604 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
Npc1O35604 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Npc1O35604 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Npc1O35604 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Npc1O35604 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.41■□□□□ 0.06
Npc1O35604 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Npc1O35604 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Npc1O35604 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Npc1O35604 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Npc1O35604 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Npc1O35604 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Npc1O35604 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Npc1O35604 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Npc1O35604 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.4■□□□□ 0.06
Npc1O35604 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.4■□□□□ 0.06
Npc1O35604 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Npc1O35604 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Npc1O35604 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Npc1O35604 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Npc1O35604 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Npc1O35604 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.4■□□□□ 0.06
Npc1O35604 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Npc1O35604 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Npc1O35604 Gm5864-201ENSMUST00000202263 970 ntBASIC15.4■□□□□ 0.06
Npc1O35604 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.4■□□□□ 0.06
Npc1O35604 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms