Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn6O35454 Gm8872-201ENSMUST00000197475 1341 ntBASIC17.06■□□□□ 0.32
Clcn6O35454 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Clcn6O35454 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn6O35454 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn6O35454 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Clcn6O35454 Gm14417-201ENSMUST00000120036 1074 ntBASIC17.06■□□□□ 0.32
Clcn6O35454 Gm6182-201ENSMUST00000156439 1208 ntBASIC17.06■□□□□ 0.32
Clcn6O35454 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC17.06■□□□□ 0.32
Clcn6O35454 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn6O35454 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC17.06■□□□□ 0.32
Clcn6O35454 Gm37025-201ENSMUST00000195159 829 ntBASIC17.06■□□□□ 0.32
Clcn6O35454 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn6O35454 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Clcn6O35454 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Clcn6O35454 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn6O35454 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.06■□□□□ 0.32
Clcn6O35454 AC131743.3-201ENSMUST00000222099 662 ntBASIC17.06■□□□□ 0.32
Clcn6O35454 Gm14005-208ENSMUST00000223654 681 ntBASIC17.06■□□□□ 0.32
Clcn6O35454 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Clcn6O35454 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn6O35454 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn6O35454 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Clcn6O35454 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn6O35454 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Clcn6O35454 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Clcn6O35454 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn6O35454 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Clcn6O35454 Gm38195-201ENSMUST00000194247 1499 ntBASIC17.05■□□□□ 0.32
Clcn6O35454 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Clcn6O35454 Gm38157-201ENSMUST00000194178 1698 ntBASIC17.05■□□□□ 0.32
Clcn6O35454 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Gm15225-201ENSMUST00000120449 1017 ntBASIC17.05■□□□□ 0.32
Clcn6O35454 Gm7638-201ENSMUST00000121348 967 ntBASIC17.05■□□□□ 0.32
Clcn6O35454 Gm17661-201ENSMUST00000170317 270 ntBASIC17.05■□□□□ 0.32
Clcn6O35454 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.05■□□□□ 0.32
Clcn6O35454 Gm18382-201ENSMUST00000194394 582 ntBASIC17.05■□□□□ 0.32
Clcn6O35454 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC17.05■□□□□ 0.32
Clcn6O35454 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Gm3375-201ENSMUST00000203929 796 ntBASIC17.05■□□□□ 0.32
Clcn6O35454 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 AC154757.2-201ENSMUST00000228885 743 ntBASIC17.05■□□□□ 0.32
Clcn6O35454 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Clcn6O35454 Gm5417-201ENSMUST00000079706 384 ntBASIC17.05■□□□□ 0.32
Clcn6O35454 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Clcn6O35454 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Clcn6O35454 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Clcn6O35454 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Clcn6O35454 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Clcn6O35454 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.05■□□□□ 0.32
Clcn6O35454 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Clcn6O35454 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Clcn6O35454 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.04■□□□□ 0.32
Clcn6O35454 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Clcn6O35454 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC17.04■□□□□ 0.32
Clcn6O35454 Gm20852-202ENSMUST00000188011 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC17.04■□□□□ 0.32
Clcn6O35454 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC17.04■□□□□ 0.32
Clcn6O35454 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC17.04■□□□□ 0.32
Clcn6O35454 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Clcn6O35454 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.04■□□□□ 0.32
Clcn6O35454 AC154848.1-201ENSMUST00000225451 846 ntBASIC17.04■□□□□ 0.32
Clcn6O35454 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Prob1-201ENSMUST00000097619 3021 ntBASIC17.04■□□□□ 0.32
Clcn6O35454 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Clcn6O35454 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clcn6O35454 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms