Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
B020004C17RikJ3QP07 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
B020004C17RikJ3QP07 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
B020004C17RikJ3QP07 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
B020004C17RikJ3QP07 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
B020004C17RikJ3QP07 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
B020004C17RikJ3QP07 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.6■□□□□ 0.41
B020004C17RikJ3QP07 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Gm14722-201ENSMUST00000118943 689 ntBASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Gm8318-201ENSMUST00000182954 872 ntBASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Gm18057-201ENSMUST00000208220 503 ntBASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
B020004C17RikJ3QP07 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
B020004C17RikJ3QP07 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
B020004C17RikJ3QP07 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.58■□□□□ 0.41
B020004C17RikJ3QP07 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.58■□□□□ 0.41
B020004C17RikJ3QP07 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm22065-201ENSMUST00000103753 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm22066-201ENSMUST00000103761 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm24932-201ENSMUST00000103763 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm24115-201ENSMUST00000103799 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm22190-201ENSMUST00000103827 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm22191-201ENSMUST00000103831 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm24721-201ENSMUST00000103849 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm28018-201ENSMUST00000103869 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm26399-201ENSMUST00000103937 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm25349-201ENSMUST00000177728 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm23616-201ENSMUST00000177797 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm25871-201ENSMUST00000177816 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm24752-201ENSMUST00000178240 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm24496-201ENSMUST00000178287 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm25649-201ENSMUST00000178476 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm25548-201ENSMUST00000178681 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm23147-201ENSMUST00000178841 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm26095-201ENSMUST00000179270 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm22171-201ENSMUST00000179283 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm23936-201ENSMUST00000179354 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm22619-201ENSMUST00000179516 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm25255-201ENSMUST00000179579 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm24755-201ENSMUST00000179691 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm26506-201ENSMUST00000179692 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm25086-201ENSMUST00000179931 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm23243-201ENSMUST00000180047 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm24659-201ENSMUST00000180212 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm24169-201ENSMUST00000180244 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm23689-201ENSMUST00000180354 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm27359-201ENSMUST00000184153 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm27785-201ENSMUST00000184268 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm27466-201ENSMUST00000184396 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm27703-201ENSMUST00000184836 110 ntBASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
B020004C17RikJ3QP07 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Gm13216-201ENSMUST00000117145 591 ntBASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Gm5186-201ENSMUST00000218781 920 ntBASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
B020004C17RikJ3QP07 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms