Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Grk6-207ENSMUST00000225925 2769 ntBASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb9E9Q5G2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb9E9Q5G2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb9E9Q5G2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb9E9Q5G2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Pcdhb9E9Q5G2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb9E9Q5G2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb9E9Q5G2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.56
Pcdhb9E9Q5G2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb9E9Q5G2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
Pcdhb9E9Q5G2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb9E9Q5G2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb9E9Q5G2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb9E9Q5G2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb9E9Q5G2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb9E9Q5G2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb9E9Q5G2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb9E9Q5G2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb9E9Q5G2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb9E9Q5G2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb9E9Q5G2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Gm5682-201ENSMUST00000173402 505 ntBASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Mir5126-201ENSMUST00000175513 77 ntBASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb9E9Q5G2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Gm7222-201ENSMUST00000117512 906 ntBASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 AV026068-213ENSMUST00000223675 1171 ntBASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhb9E9Q5G2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb9E9Q5G2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb9E9Q5G2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms