Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC21.57■■□□□ 1.04
Chd2E9PZM4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd2E9PZM4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd2E9PZM4 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd2E9PZM4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd2E9PZM4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd2E9PZM4 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd2E9PZM4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Chd2E9PZM4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Chd2E9PZM4 AC124732.1-201ENSMUST00000221551 910 ntBASIC21.57■■□□□ 1.04
Chd2E9PZM4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd2E9PZM4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd2E9PZM4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd2E9PZM4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC21.57■■□□□ 1.04
Chd2E9PZM4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd2E9PZM4 Gm7901-201ENSMUST00000120430 1597 ntBASIC21.56■■□□□ 1.04
Chd2E9PZM4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Chd2E9PZM4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Chd2E9PZM4 Gm8410-201ENSMUST00000117225 605 ntBASIC21.56■■□□□ 1.04
Chd2E9PZM4 Gm11543-201ENSMUST00000120758 370 ntBASIC21.56■■□□□ 1.04
Chd2E9PZM4 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd2E9PZM4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC21.56■■□□□ 1.04
Chd2E9PZM4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd2E9PZM4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Chd2E9PZM4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd2E9PZM4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC21.56■■□□□ 1.04
Chd2E9PZM4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd2E9PZM4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC21.55■■□□□ 1.04
Chd2E9PZM4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chd2E9PZM4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd2E9PZM4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chd2E9PZM4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC21.54■■□□□ 1.04
Chd2E9PZM4 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd2E9PZM4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chd2E9PZM4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC21.54■■□□□ 1.04
Chd2E9PZM4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chd2E9PZM4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Chd2E9PZM4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chd2E9PZM4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd2E9PZM4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd2E9PZM4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chd2E9PZM4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chd2E9PZM4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Chd2E9PZM4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd2E9PZM4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd2E9PZM4 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd2E9PZM4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd2E9PZM4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd2E9PZM4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.53■■□□□ 1.04
Chd2E9PZM4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd2E9PZM4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Chd2E9PZM4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chd2E9PZM4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd2E9PZM4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chd2E9PZM4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Chd2E9PZM4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chd2E9PZM4 Gm22189-201ENSMUST00000103822 86 ntBASIC21.52■■□□□ 1.04
Chd2E9PZM4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Chd2E9PZM4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Cdk7-205ENSMUST00000225990 1159 ntBASIC21.52■■□□□ 1.04
Chd2E9PZM4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Gm8096-201ENSMUST00000209921 1591 ntBASIC21.52■■□□□ 1.04
Chd2E9PZM4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC21.52■■□□□ 1.04
Chd2E9PZM4 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC21.52■■□□□ 1.04
Chd2E9PZM4 Gm15483-201ENSMUST00000120338 456 ntBASIC21.52■■□□□ 1.04
Chd2E9PZM4 Gm15321-201ENSMUST00000121290 288 ntBASIC21.52■■□□□ 1.04
Chd2E9PZM4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chd2E9PZM4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms