Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Mir6404-201ENSMUST00000183699 94 ntBASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Gm6089-201ENSMUST00000197666 938 ntBASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Gm5867-201ENSMUST00000063197 592 ntBASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh17E9PXF0 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.71□□□□□ -0.06
Pcdh17E9PXF0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.71□□□□□ -0.06
Pcdh17E9PXF0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh17E9PXF0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh17E9PXF0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh17E9PXF0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Pcdh17E9PXF0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh17E9PXF0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Gm5364-201ENSMUST00000216789 889 ntBASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh17E9PXF0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pcdh17E9PXF0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms